Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  203 bits (516), Expect = 2e-56
 Identities = 127/346 (36%), Positives = 200/346 (57%), Gaps = 12/346 (3%)

Query: 181 ILFLTLLVGSITTLGITYLLV-----PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEF 235
           I+ + +++ ++ T+G+   L      P++R + +  + ++  L+  +     DE  +L  
Sbjct: 191 IVIIFVVIAALCTIGLALWLTRSIVGPLQRAVTAAEQVANGDLTHTIEVDGEDEVTRLLR 250

Query: 236 ALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAA 295
           AL M Q      +  IG ++ QL   A +L    E S    ++Q AE +Q ATAINEM +
Sbjct: 251 ALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATAINEMTS 310

Query: 296 SIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSND 355
           +++EVA  A   +++S  ++   ++GQ  V +  QSI  L   V     ++  L   S D
Sbjct: 311 AVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATSTLVQNLANQSQD 370

Query: 356 ISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRM 415
           I KVL+VIRSIA+QTNLLALNAAIEAARAGESGRGFAVVADEVR LA RTQQST++I  M
Sbjct: 371 IGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDSM 430

Query: 416 IDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQ 475
           +  ++  +  A+  M  S  +A  ++  A+ A ++L+ I   ++ I+  ++ +A+A ++Q
Sbjct: 431 VSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVIASAAEEQ 490

Query: 476 SAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELA 521
           + VS E++ +I NIR       D    + + A  ++  SH LS LA
Sbjct: 491 AQVSREVDRNIVNIR-------DLSMQSTQGANQISASSHELSRLA 529