Pairwise Alignments
Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a
Score = 214 bits (545), Expect = 8e-60
Identities = 128/348 (36%), Positives = 206/348 (59%), Gaps = 1/348 (0%)
Query: 178 LMSILFLTLLVGSITTLGITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFA 236
L+++ + LL+G + IT + P+ + + + +D L+ L T R DE G L+
Sbjct: 293 LLTVAVIVLLLGIFAAILITRQITRPLDSTVIAARRIADGDLTNDLSTTRQDELGLLQNT 352
Query: 237 LRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAAS 296
++ +IG I + Q+ A +L E+++ ++Q+ E +QVATA+N+MA++
Sbjct: 353 MQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMNQMAST 412
Query: 297 IQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDI 356
+QEVA + A+ ++ A+ G +V A++ I++L EV Q + + L + S+ I
Sbjct: 413 VQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRLIQDSDKI 472
Query: 357 SKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMI 416
V++VI+++A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST +I+ +I
Sbjct: 473 GGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSSTTEIEALI 532
Query: 417 DTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQS 476
+LQ A +M S Q+ +V A+QA ++L I + I MS Q++ A ++QS
Sbjct: 533 KSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQISAAAEEQS 592
Query: 477 AVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
AV+DEIN S+ ++R AD + + +A +A L NL ++ +F
Sbjct: 593 AVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARF 640
Score = 27.7 bits (60), Expect = 0.001
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 458 VSDITGMSVQMATAVDQQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNL 517
+ I+ Q+ATA ++ SAVS++ + ++ ++ D A + VA + +
Sbjct: 364 IGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMNQMASTVQEVAQNTEDA 423
Query: 518 SELAQQFWER 527
S+ A+Q +R
Sbjct: 424 SQAARQASDR 433