Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (557), Expect = 3e-61
 Identities = 133/348 (38%), Positives = 202/348 (58%), Gaps = 1/348 (0%)

Query: 178 LMSILFLTLLVGSITTLGIT-YLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFA 236
           L+S+  + LLVG      IT  + VP+   + +  + +D  L+    T R DE G L+  
Sbjct: 332 LLSVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIADGDLTHDSSTTRQDELGLLQNT 391

Query: 237 LRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAAS 296
           ++        +IG IG+   Q+   A  L    E+++   + Q+ E +QVATA+NEMA++
Sbjct: 392 MQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMAST 451

Query: 297 IQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDI 356
           +QEVA   + A+ +++ A+     G  +V  A++ I +L  EV Q  + +  L E S  I
Sbjct: 452 VQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKI 511

Query: 357 SKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMI 416
             V++VI+++A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST +I+ +I
Sbjct: 512 GSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALI 571

Query: 417 DTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQS 476
             LQ     A  +M+ S Q+   +V  A+QA  AL  I + +  I  MS Q++ A +QQS
Sbjct: 572 QALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQS 631

Query: 477 AVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           AV++EIN S+ ++R  AD +    + +A     +A L  +L  +  +F
Sbjct: 632 AVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARF 679