Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  224 bits (572), Expect = 6e-63
 Identities = 130/342 (38%), Positives = 211/342 (61%), Gaps = 1/342 (0%)

Query: 184 LTLLVGSITTLGITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFALRMAQA 242
           L +++G I  + IT  +  P++  +    + +   L+Q L   RSDE G L+  ++    
Sbjct: 297 LAIILGIIAAVIITRQITRPLRETLAVVDRIASGDLTQTLAVTRSDELGVLQQGIQRMGT 356

Query: 243 ETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVAT 302
               +IG I D+  Q+   A +L    E+++   + Q+ ET+QVATA++EM+A++ EVA 
Sbjct: 357 TLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVAR 416

Query: 303 GAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKVLEV 362
            A+ A+ ++ +A+ E   G ++V +A   I  L +EV ++   + ELE+ S+ I KV++V
Sbjct: 417 NAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVMDV 476

Query: 363 IRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQGR 422
           I+++A+QTNLLALNAAIEAARAGE+GRGFAVVADEVRGLA RTQQST++I+ ++  LQ  
Sbjct: 477 IKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQSG 536

Query: 423 AKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVSDEI 482
            +   ++M +S +  + SV  ++QA  +L  I + VS I  M+ Q+A A ++QSAV++EI
Sbjct: 537 TRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEI 596

Query: 483 NHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           + SI N+R  ++      +  A  +  +A L   L  +  +F
Sbjct: 597 SRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRF 638