Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (532), Expect = 2e-58
 Identities = 135/351 (38%), Positives = 194/351 (55%), Gaps = 3/351 (0%)

Query: 177 ALMSILF--LTLLVGSITTLGITYLLVPMKRLIQSYCK-DSDNPLSQVLYTGRSDEFGQL 233
           A+ + LF  + +LV  +T + I  ++ P+  + Q       D  L+    T   DE  ++
Sbjct: 268 AMATTLFAVIAVLVAIVTFMIIRAIITPINNINQVISHVGKDKNLTLRCDTQGGDEIAEI 327

Query: 234 EFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEM 293
                       A+I ++ DA N +N+   +L  N  +++     Q  ET+ VATAI EM
Sbjct: 328 GQHFNEMVESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEM 387

Query: 294 AASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHS 353
            A+I E+A   + AA  +   +     GQQ V Q  + I  L  +++ +  V+ ELE  S
Sbjct: 388 GATIDEIAKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDS 447

Query: 354 NDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQ 413
             I  VL+VIR IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+ST +I 
Sbjct: 448 GTIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIA 507

Query: 414 RMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVD 473
            +I TLQ R +  V +ME S +Q   S EQA  A   L  I + V++I  MS Q+A A++
Sbjct: 508 GIIQTLQSRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIE 567

Query: 474 QQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           +QS+V+ E+N ++  IR  A+ +      NAK ++ V   +  L     QF
Sbjct: 568 EQSSVAAEVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQF 618