Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (513), Expect = 3e-56
 Identities = 129/340 (37%), Positives = 190/340 (55%), Gaps = 9/340 (2%)

Query: 182 LFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFALRMAQ 241
           + +T   G     G+   +  +++ ++   + SD  +S  ++  R DE G +   L    
Sbjct: 199 VLITSFFGVWVNRGVMTPVTEIRQKLRQIREKSDMTVSFTVF--RDDELGHIAKDLNGVV 256

Query: 242 AETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVA 301
                ++  I +A++ L   A++L     ++N    +QQ+ETEQ ATA+NEM A++ EVA
Sbjct: 257 NHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMTAAVAEVA 316

Query: 302 TGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKVLE 361
             +  AA S+ +A+     G  IV Q+  S++ L  ++     VI EL   S +I +VL+
Sbjct: 317 QSSNSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIGRVLD 376

Query: 362 VIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQG 421
           VI+SIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT +ST +I+ MI++LQ 
Sbjct: 377 VIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQ 436

Query: 422 RAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVSDE 481
             K AV  ME    Q   + E    A  AL  I   V  IT ++  +ATA D+QS V++ 
Sbjct: 437 GVKSAVNSMEQGIAQVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADEQSCVAES 496

Query: 482 INHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELA 521
           IN SI  I        D  + + + A  ++   H L++LA
Sbjct: 497 INQSIIAIS-------DIAQESTQAANDLSEAVHQLAQLA 529