Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  201 bits (510), Expect = 7e-56
 Identities = 117/277 (42%), Positives = 170/277 (61%)

Query: 213 DSDNPLSQVLYTGRSDEFGQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKS 272
           D D  L+Q +   R DE G+L  A  +  A+   ++  I   +  +++   +L      +
Sbjct: 229 DGDGNLTQRIPITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTT 288

Query: 273 NILTSEQQAETEQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSI 332
             ++ EQ+   + + TA+NEM+A+++EVA+ A H A      N +TI G+ I++Q+   I
Sbjct: 289 IGISYEQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHI 348

Query: 333 TELEHEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFA 392
            +L   V QA  VI +L  +S +I+ VL+VIRSIA+QTNLLALNAAIEAARAGE GRGFA
Sbjct: 349 QQLSESVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFA 408

Query: 393 VVADEVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALT 452
           VVADEVR LA+RT+ ST DIQRMI+ LQ     AV  +E  +     +V  A Q  DAL 
Sbjct: 409 VVADEVRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALD 468

Query: 453 GIGKRVSDITGMSVQMATAVDQQSAVSDEINHSISNI 489
            I    S ++ MS Q ATA ++Q+ V++EIN +++ +
Sbjct: 469 EILNSTSKVSEMSTQTATATEEQTHVTEEINRNLTEL 505



 Score = 35.4 bits (80), Expect = 5e-06
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 257 QLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVATGAKHAANSSESANH 316
           +L +  ND + +IE    LT+       Q   A++E+  S  +V+  +   A ++E   H
Sbjct: 434 ELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEILNSTSKVSEMSTQTATATEEQTH 493

Query: 317 ETISGQQIVSQASQSITELEHEVSQAKQVIHELEE 351
                  +  + ++++TEL  +      VI E ++
Sbjct: 494 -------VTEEINRNLTELSDKTRYCNTVIQETQQ 521