Pairwise Alignments

Query, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., prepilin-type N-terminal cleavage/methylation domain from Pseudomonas stutzeri RCH2

 Score = 43.1 bits (100), Expect = 2e-09
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 7/75 (9%)

Query: 5  QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALIEG 64
          +GFTLIELI+ + +L ++  IAAP F       ++N   ++   + SAL L  S+A+  G
Sbjct: 5  RGFTLIELIVTLAVLAILLAIAAPSF---QSTIQSNRTQTITNDLTSALQLARSEAVKRG 61

Query: 65 QDIG----KGEITIN 75
            +      GE+  N
Sbjct: 62 AKVDICRRNGEVCAN 76