Pairwise Alignments

Query, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., MSHA pilin protein MshA (RefSeq) from Shewanella amazonensis SB2B

 Score = 68.6 bits (166), Expect = 6e-17
 Identities = 30/64 (46%), Positives = 47/64 (73%)

Query: 1  MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60
          M K QGFTLIEL++ I+ILG++AV AAP+FIN+  DA+ + +    A ++ A +L++S+A
Sbjct: 1  MKKQQGFTLIELVVVIIILGILAVTAAPKFINLQSDARVSALSGAKAAIQGANSLVYSRA 60

Query: 61 LIEG 64
           + G
Sbjct: 61 ALAG 64