Pairwise Alignments

Query, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., pilin from Marinobacter adhaerens HP15

 Score = 57.0 bits (136), Expect = 2e-13
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 3   KNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQALI 62
           K +GFTLIEL++ I ILG++A  A PRF  +S+ A  +++   A  + + + L+ +Q + 
Sbjct: 9   KQKGFTLIELVVVIAILGILAAFALPRFAQLSEQAHQSSIKGTAGALSAGVALVKAQWVS 68

Query: 63  EGQDIGKGEITINGVKTPLLNG---YPSVNGKDSFEEINAQVQAW 104
            GQ      +   G     +N      S NG       N  +Q W
Sbjct: 69  NGQTAAAATVDGFGDDDVAVNDEGWATSTNGNTGAPNENRCIQVW 113