Pairwise Alignments

Query, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., MSHA pilin protein MshA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 68.2 bits (165), Expect = 7e-17
 Identities = 30/68 (44%), Positives = 50/68 (73%)

Query: 1  MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60
          M + QGFTLIEL++ I+ILG++AV AAP+FIN+  DA+A+ +  +   ++ A +L+ S+A
Sbjct: 1  MKRQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARASALQGLKGAIQGANSLVFSKA 60

Query: 61 LIEGQDIG 68
           + G++ G
Sbjct: 61 ALAGKEKG 68