Pairwise Alignments

Query, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

Subject, 186 a.a., pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 62.0 bits (149), Expect = 6e-15
 Identities = 27/56 (48%), Positives = 42/56 (75%)

Query: 3  KNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHS 58
          ++ GFTLIEL++ I++LGV+AV+A P+FIN+ +DA+  T+ +  AG +S L L  S
Sbjct: 12 QSAGFTLIELVVVIIVLGVLAVVALPKFINVQQDAQIATVKAAGAGFKSGLNLARS 67