Pairwise Alignments

Query, 146 a.a., ribonuclease H from Vibrio cholerae E7946 ATCC 55056

Subject, 150 a.a., Ribonuclease HI (EC 3.1.26.4) from Pseudomonas fluorescens FW300-N2E2

 Score = 85.5 bits (210), Expect = 3e-22
 Identities = 56/140 (40%), Positives = 75/140 (53%), Gaps = 8/140 (5%)

Query: 2   SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALE 61
           S  ++ DGA   N  G    G  LV    + E+   E+ T N +     +EL+  I  LE
Sbjct: 4   SVELFTDGACKGNP-GPGGWGALLVCKGVEKELWGGEANTTNNR-----MELMGAIRGLE 57

Query: 62  YAEDG-DVIY-SDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVE 119
             +   DV+  +DS Y +KG N WM +WK RGW+ A K+PVKN  LW+ +DE  +R  V 
Sbjct: 58  ELKRPCDVLLVTDSQYVMKGINEWMANWKKRGWKTAAKEPVKNADLWKLLDEQVNRHNVT 117

Query: 120 VFKVKAHSGIEGNERADLLA 139
              V+ H G  GNERAD LA
Sbjct: 118 WKWVRGHIGHHGNERADQLA 137