Pairwise Alignments

Query, 146 a.a., ribonuclease H from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., RNase HI from Synechococcus elongatus PCC 7942

 Score = 84.7 bits (208), Expect = 9e-22
 Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 11/145 (7%)

Query: 5   IYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALEYAE 64
           +Y DGA   N      GG G+ +   D  +  +E    +  T N  +EL A I ALE+  
Sbjct: 8   LYTDGACTGNP---GPGGWGVQIQFADGTV--QELGGRDAATTNNRMELQAAIAALEFWR 62

Query: 65  DGD-----VIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVE 119
           D        +Y+DS+Y +KG   W+  W+ +GW+ A  KPV N+ LW  +D+L+S   V+
Sbjct: 63  DHSDQQPVTLYTDSEYVIKGITQWLKGWQRKGWKTAAGKPVLNQDLWMHLDDLNS-PAVQ 121

Query: 120 VFKVKAHSGIEGNERADLLAVEAAE 144
              V+ HSG  GNER D +A   A+
Sbjct: 122 WQYVRGHSGDPGNERCDQIARSFAQ 146