Pairwise Alignments

Query, 146 a.a., ribonuclease H from Vibrio cholerae E7946 ATCC 55056

Subject, 169 a.a., ribonuclease HI protein from Sinorhizobium meliloti 1021

 Score = 88.6 bits (218), Expect = 4e-23
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 10/144 (6%)

Query: 3   YSIYVDGAAPNNQYGCTRGGIGLVV-MDEDNEIVHEESI--TINRKTDNAELELLALIEA 59
           Y ++ DGA  NN      GG G V+ ++E+ EI+ E+ +  T   +T N  +EL A++  
Sbjct: 15  YIVHTDGACRNNP---GPGGWGAVLQLEEEGEIIKEKDLSGTTISETTNNRMELSAVLGG 71

Query: 60  LEYAEDGDV---IYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDEL-SSR 115
           L   +D  +   + SDS Y V G + W++ WK  GWR+ADK  V N  LWQ++D+L  + 
Sbjct: 72  LRRLKDKTIPITVRSDSKYVVNGMSTWLEGWKRNGWRKADKTTVLNMDLWQELDQLQETL 131

Query: 116 KYVEVFKVKAHSGIEGNERADLLA 139
             +    VK HSG   N+R D LA
Sbjct: 132 GPISWVWVKGHSGDPMNDRCDRLA 155