Pairwise Alignments

Query, 146 a.a., ribonuclease H from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., ribonuclease H (RefSeq) from Shewanella loihica PV-4

 Score = 64.3 bits (155), Expect = 1e-15
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 13/149 (8%)

Query: 5   IYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL---- 60
           IY DG    N  G    G+ L    E  E+ +      N K  N   EL AL +AL    
Sbjct: 88  IYTDGGCEPNP-GEAGSGLALYKKGELAELWYG---LYNPKGTNNTAELNALHQALLMAR 143

Query: 61  EYAEDG--DVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDEL--SSRK 116
           +Y E G    I+SDS Y +K  ++W   WK  GWRR   + + N  + Q+  EL  S + 
Sbjct: 144 QYLEQGLRVHIHSDSQYAIKCISLWAYGWKANGWRRKTGE-IANLSVIQEAHELYDSLKD 202

Query: 117 YVEVFKVKAHSGIEGNERADLLAVEAAEA 145
            +++  V AH GIEGNE AD +++   E+
Sbjct: 203 KLKLSHVAAHVGIEGNELADRMSIYTIES 231