Pairwise Alignments

Query, 214 a.a., inovirus Gp2 family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., transposase (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 8e-31
 Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 11/217 (5%)

Query: 4   NLTITHESTFNGNKVYIDKEGLVVEYLEGIESVLENALEQYARLFIVRVDLNLPTDFRGD 63
           NL +     + G KV  +   L  +YL+ I   +  AL+++ R  +VR DL+LP     D
Sbjct: 10  NLVVIDNGQYQGWKV--NSRPLSKQYLDAILRTMHAALDEHPRTLMVRFDLHLPLLNFDD 67

Query: 64  -----DSAVMTRFFRSLKSQVAAYRRRSARLNRKPYRETTIRYVWAKECDTSTSSHYHVA 118
                DS V+++FF+SL +++   R    R  ++ +   T+RYVW KEC  + + HYHVA
Sbjct: 68  SPRFYDSTVISKFFKSLNAKIQHDRAVKLREGKRTH-PCTLRYVWVKECREAATDHYHVA 126

Query: 119 LIFDRNIFRSLGDFGEYQQSLANRIRNAWKRSVEA-MYSGKEKPAIHFSKQGQYHLLRNS 177
           +  + + +  LG +     +L  RI  AW  ++    +  ++K  +H   +  Y++ RNS
Sbjct: 127 IFLNNDAYCHLGSYSNGGNNLRARIVEAWASAIGVDEFVAEDK--VHCPSKPLYYINRNS 184

Query: 178 EEFGEVFQSVFYRLSYLAKRRTKHFGKRMNNFGHSHK 214
             F   F   F RLSYLAK  TKH+G    +FG S +
Sbjct: 185 VGFTTSFAKAFERLSYLAKLETKHYGDNTRSFGCSQR 221