Pairwise Alignments

Query, 586 a.a., hemolysin from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., hemolysin A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  116 bits (290), Expect = 2e-30
 Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 24/276 (8%)

Query: 278 LPPVAERLPLADLLEDIAQLPYADHMLRHNQFDVYCTTADNIPSLMHEIGRIRELNFREV 337
           + PV++ L  A+L ED         M   +   +Y  T  N P++M EIGR+RE+ FR  
Sbjct: 5   IKPVSKELLKAELTEDRRL-----RMTNKSNNQIYIITHQNAPNVMREIGRLREIAFRAA 59

Query: 338 GEGTGCALDIDRFD---RDYLHLFIWDREKNQLVGAYRLGL-VDKLIEHKGISGLYSSTL 393
           G GTG ++DID +D     Y  L +W+ E  +++G YR  L  D   +  G   L +S +
Sbjct: 60  GGGTGLSMDIDEYDTMEHPYKQLIVWNPEAEEILGGYRYLLGTDVRFDEAGAPILATSHM 119

Query: 394 FHYDQRFLNN-MGNAIEMGRSVIDSQYQ------KSMAALLLLWKGIGTYVERHPQYTHL 446
           FH+   F+   +   IE+GRS +  +YQ      K + AL  LW G+G      P   + 
Sbjct: 120 FHFSDAFIKEYLPQTIELGRSFVTLEYQSTRAGSKGLFALDNLWDGLGALTVVMPNVKYF 179

Query: 447 FGPVSISNDYSEQARRLLADTMTLHYYDSEQAELVMATNPLPTGQAQWNASLL----TSL 502
           FG V++   Y  + R ++   +  H+ D E  ELV    PL    +      L    T  
Sbjct: 180 FGKVTMYPSYHRRGRDMILYFLKKHFNDRE--ELVTPMEPLILETSDEELRTLFCKDTFK 237

Query: 503 ADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSF 538
            D ++L+  I ++  G  IP L+  Y+ L+  +  F
Sbjct: 238 EDYKILNTEIRKL--GYNIPPLVNAYMSLSPTMRMF 271