Pairwise Alignments

Query, 586 a.a., hemolysin from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 29/216 (13%)

Query: 43  DTQAFLRFTLDVLGIDY----------QVVRGKLTHVPAQGATIVVANHPLGCVEGVILA 92
           +   FL  + D LG+D+          +V    + ++P +G    V+NHPLG  +GV L 
Sbjct: 42  EINVFLNESKDKLGVDFLEACMEFLDAKVEVKGIENLPKEGLYTFVSNHPLGGQDGVALG 101

Query: 93  ELL-LCVRSDVKILANQYLKLVPELTSLFIGVDVFEGADAAKANLHALRQAHKHLEQGGL 151
            +L       VK L N  L  +  L  L + ++        K      +      +    
Sbjct: 102 YVLGRHYDGKVKYLVNDLLMNLRGLAPLCVPIN-----KTGKQAKDFPKMVEAGFQSDDQ 156

Query: 152 LLMFPAGEVSQLVDSKQGRLEDKEWSQSVSRLVKKHQA--HTVPVYIDGHNSTPFYLAGK 209
           ++MFPAG  S+    + G + D EW ++   ++K  QA    VPV+  G NS  FY    
Sbjct: 157 MIMFPAGLCSR---RQNGVIRDLEWKKTF--IIKSIQAKRDVVPVHFGGRNSDFFYNLAN 211

Query: 210 IHPML------RTLMLGRELLNKQHTQIGIAIGEGI 239
           +   L        L L  E+   +H    +  G+ I
Sbjct: 212 VCKALGIKFNIAMLYLADEMFKNRHKTFTVTFGKPI 247