Pairwise Alignments

Query, 586 a.a., hemolysin from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score = 54.3 bits (129), Expect = 6e-12
 Identities = 76/311 (24%), Positives = 124/311 (39%), Gaps = 60/311 (19%)

Query: 276 RSLPPVAERLPLADLLEDIAQLPYADHMLR-HNQFDVYCTTADNIPSLMHEIGRIRELNF 334
           R LP     LPLA + E   +LP A+  +   ++  V     D       E+   + L +
Sbjct: 2   RELP--TPTLPLASIFES-RRLPRAEETVTAQHRLQVTWARTDE------ELREAQRLRY 52

Query: 335 REVGEGTGC------ALDIDRFDRDYLHLFIWDREKNQLVGAYRLGLVDKLIEHKG--IS 386
           R   +  G        LD+D FD    HL + D +  ++VG YR      L  H+   I 
Sbjct: 53  RVFADEMGARLTGPAGLDVDSFDSYCDHLLVRDLDTLKVVGTYR-----ALPPHQAARIG 107

Query: 387 GLYSSTLFHYDQRFLNNMGNAIEMGRSVIDSQYQKSMAALLLLWKGIGTYVERHPQYTHL 446
            LY+ + F    R  +     +E+GRS +   Y +S + ++ LW G+  Y+ +H  Y  +
Sbjct: 108 RLYAESEFDV-SRLTHLRAKMVEVGRSCVHPDY-RSGSVIMSLWAGLAAYM-KHNGYETM 164

Query: 447 FGPVSIS----NDYSEQARRLLADT-MTLHYYDSEQAELVMATNPLPTGQAQWNASLLTS 501
            G  S++      Y+      L D+ +T   Y +       A  PLP  + Q  A +   
Sbjct: 165 LGCASVAMVDGGHYAANLYCSLRDSALTAPEYRA------FAHTPLPVDELQTGAEVAP- 217

Query: 502 LADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSFNV-DPAFNNALDGLIVVDLRNVP 560
                               P L++ YL L  K+      DP FN A D L +  L ++ 
Sbjct: 218 --------------------PPLVKGYLRLGAKICGAPAWDPDFNTA-DFLTLFRLSDIN 256

Query: 561 TKTLARYMGQS 571
            +    ++G +
Sbjct: 257 ARYARHFLGDA 267