Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Pseudomonas fluorescens FW300-N2E2

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 16/230 (6%)

Query: 51  APKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTL 110
           A ++M K   + SNG ++ +        +   V + +++G   +   S       VP+  
Sbjct: 41  AEESMGKTLEKESNGELKFKYFPGGVLGSEKEVIEQMQTGAVQMSRVSLGIVGPVVPDVN 100

Query: 111 FFSSMPFGMIATEQYAWFYYGG--GMPLMEKV----YAPHNLLSFPGGNSDIQMGGWFKK 164
            F+ MPF +   + +      G  G  +++++    +    L    GG  ++    + KK
Sbjct: 101 VFN-MPF-IFRDQAHMRAVIDGDVGDAILDRITNSEFGLVALAWMDGGTRNL----YTKK 154

Query: 165 EINSVDDLQGLKMRIPG--FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFD 222
            ++ ++DL+G+K+R+ G     E    +GA    +  GE++++L+ G ID  E   P   
Sbjct: 155 PVHKLEDLKGMKIRVQGNPMFIETFNAMGANGIAMDTGEIFSALQTGVIDGAENNPPTL- 213

Query: 223 LRMGFHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVA 272
           L    ++ A YY    H    E   +++K  W+ L  + Q +++ A + A
Sbjct: 214 LEHNHYQNAKYYSLTGHLILPE-PIVMSKITWNKLTPEQQDMVKKAAKAA 262