Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  258 bits (660), Expect = 1e-73
 Identities = 139/336 (41%), Positives = 197/336 (58%), Gaps = 4/336 (1%)

Query: 23  GTAQANEPP-VYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPL 81
           G   A+EP   Y   +   W  N P LG A + +A     MS+GR+ I++ +A +    L
Sbjct: 32  GQQAASEPAKTYTWKMVTAWPKNYPGLGTAAERLADRVKVMSDGRLTIKVYAAGELVPAL 91

Query: 82  GVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVY 141
            VFD V  G  +LGH ++YYWKGKVP   FF+S+PFG+ A E  AW   G G    E+ Y
Sbjct: 92  EVFDAVSRGTAELGHGAAYYWKGKVPTAQFFTSVPFGLSAIEMNAWLSRGEGQKFWEEAY 151

Query: 142 APHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTNIAPGE 201
           AP  +     GN+ +QMGGW+ KEIN++ DL+GLK+R+PG  GEVLA+LGA   N+  GE
Sbjct: 152 APFGVKPMVVGNTGMQMGGWYNKEINALGDLRGLKIRMPGLGGEVLARLGATTVNLPGGE 211

Query: 202 LYTSLERGTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKKWDTLPKD 260
           ++T+L+ G IDA +WV P  DL  G HK A  YYY  W EP +  + LVN+K  DTLP+D
Sbjct: 212 VFTALQTGAIDATDWVSPYNDLAFGLHKAAKYYYYPGWQEPQAVLELLVNQKAMDTLPED 271

Query: 261 IQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQ 320
           +Q IL  A R A+ DM +  +  NA +   +K +   ++++ FP  VL A+++ +  +L 
Sbjct: 272 LQAILTEATRAASRDMMDDYVYNNALALEQLKQQ--GVELKRFPDEVLDAMQEQSELVLG 329

Query: 321 EQAASDPLAKEIIDSQQAYLTKVRDWTRISTQAYLN 356
           E AA   L   I  S +A+  +V+    IS +   N
Sbjct: 330 ELAAQSELNGRIWASMKAFQEQVKPMHEISEKELYN 365