Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  269 bits (688), Expect = 8e-77
 Identities = 138/338 (40%), Positives = 197/338 (58%), Gaps = 5/338 (1%)

Query: 21  VLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAP 80
           V G ++  E   +   +  +W  N P +G   +  A L  EMS GR++I++ +A +    
Sbjct: 30  VAGESKQAEQQTFNWKMVTSWPKNFPGVGVGAERFANLVNEMSGGRLKIKVYAAGELVPA 89

Query: 81  LGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKV 140
           L VFD V  G  ++GH + YYWKGKVP   FF ++PFG  A E  AW + GGGM L E+V
Sbjct: 90  LEVFDAVSRGTAEMGHGAPYYWKGKVPAAQFFCALPFGPNAQEMNAWLHRGGGMQLWEEV 149

Query: 141 YAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTNIAPG 200
           Y P+ +L    G + +Q  GWF KEINSVDD +GLKMR PG  GEVL K+G    N+  G
Sbjct: 150 YKPYGVLPMACGATGVQTAGWFNKEINSVDDFKGLKMRTPGLGGEVLTKMGGTVVNMPAG 209

Query: 201 ELYTSLERGTIDALEWVGPAFDLRMGFHKIAPYYYT-AWHEPGSETQFLVNKKKWDTLPK 259
           E++T+L+ G IDA EW+GP  DL +G HK + YYYT  W EP    +  VN K WDTLP 
Sbjct: 210 EIFTALQTGAIDATEWIGPYNDLALGLHKASKYYYTPGWQEPNVTFELDVNLKAWDTLPD 269

Query: 260 DIQVILETAFRVAAFDMYNQAIDANATSWAAMKS-EYPDIKVRDFPPAVLAALRQANNEL 318
           D++ I+  A R    DM +   D NA +  A++      ++VR  P  VLA L++   E+
Sbjct: 270 DLKAIVRAAARDVNGDMLD---DYNAKNMEALEQLREQGVEVRRLPDEVLARLKEVAAEV 326

Query: 319 LQEQAASDPLAKEIIDSQQAYLTKVRDWTRISTQAYLN 356
           +   A +DP+A ++ + Q AYL ++ D+  ++ +   N
Sbjct: 327 VDASAKADPVASKVWEQQSAYLKRLYDYAELNEKDIYN 364