Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 29/274 (10%)

Query: 35  LTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDL 94
           L +AE   A  P +  A +N+ K     +NG I+ R+ +     +   V +  + G   L
Sbjct: 27  LKIAEIHPAGYPTVV-AMENLGKKLETATNGEIKSRMFAGGVLGSEKEVIEQTQIGAVQL 85

Query: 95  GHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGG-GMPLMEKVYAPHNLLSFPGGN 153
              S       VP T  F+ MPF     +       G  G  +++ +            N
Sbjct: 86  TRVSLGSVGPVVPATNVFN-MPFVFRDIDHMRKVVDGEIGQEILDAIT-----------N 133

Query: 154 SDIQMGG-----------WFKKEINSVDDLQGLKMRIPG--FAGEVLAKLGAKPTNIAPG 200
           SD  M G           + KK I  ++DL+G+K+R+ G     + L  +GA    +  G
Sbjct: 134 SDFNMVGLAWMEAGSRSLYTKKPIRRIEDLKGMKIRVIGNPLFIDTLNAMGANGIAMDTG 193

Query: 201 ELYTSLERGTIDALEWVGPAFDLRMGFHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKD 260
           E++++L+ G ID  E   P   L     ++A  +YT  H        L++K  W+ L  +
Sbjct: 194 EIFSALQSGVIDGAENNSPTL-LEHNHFRVAK-HYTQTHHLILPEPLLMSKDTWNKLSPE 251

Query: 261 IQVILETAFRVAAFDMYNQAIDANATSWAAMKSE 294
            Q  ++   + A  +  +  +     S   +K+E
Sbjct: 252 QQATVKKLAKEAQLEERDLWVAKETASNEKLKAE 285