Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., C4-dicarboxylate ABC transporter from Azospirillum brasilense Sp245

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 19/280 (6%)

Query: 7   LNKSRIMLALVLSTVLGTAQANEPPV--------YKLTLAETWGANTPILGDAPKNMAKL 58
           L ++R +LA  L T+ G       P         YKL++    G+    + +     A+L
Sbjct: 2   LTRTRPLLAAAL-TLFGALAVLSAPAEAAEYKSEYKLSVV---GSRPIPIAEGAYRWAEL 57

Query: 59  AAEMSNGRIQIRIDSANKHKAPLGV--FDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMP 116
             E + GRI +++   +          F  ++ G  DL  +S+      V     FS +P
Sbjct: 58  VTEKTRGRITVKVYPGSSLVGGDNTREFTGLRQGSIDLLVNSTINLSPTVKEANLFS-LP 116

Query: 117 FGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLK 176
           F    ++ +     G     +  +     ++    G +  +     KK + + DDL+GLK
Sbjct: 117 FLFPDSKAFDAVAQGEPGKALFGILESKQVVPLAVGENGFRALSNSKKPVRTPDDLKGLK 176

Query: 177 MRIPG--FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAPYY 234
           +R+ G     ++   LGA PT +   +L  +L  G +D  E     F L    + +   +
Sbjct: 177 VRVVGSPIFNDIFTALGANPTQMTFADLQPALSTGAVDGQENPVSLF-LAAKLYGLNQKH 235

Query: 235 YTAWHEPGSETQFLVNKKKWDT-LPKDIQVILETAFRVAA 273
            T W+       F+ NK+ W++  P+D  ++ E A + AA
Sbjct: 236 LTLWNYIADAGLFIANKEVWESWTPEDRALVREAAVQAAA 275