Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Acidovorax sp. GW101-3H11

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 20/159 (12%)

Query: 163 KKEINSVDDLQGLKMRI---PGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGP 219
           ++ IN+ DDL GLK+R+   P F  +  + LG   T +   ELYT++E+  +D  E   P
Sbjct: 155 RRAINTADDLAGLKLRVIQSPLFL-DTFSALGTNATPMPFTELYTAMEQKAVDGQE-NPP 212

Query: 220 AFDLRMGFHKI------APYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAA 273
           A  L   F+++      + + Y+AW         L++KK WD L  D + I++ A R A 
Sbjct: 213 ATILASKFYEVQKHLVLSRHMYSAW-------VLLISKKTWDGLSADERKIVQEAAREAT 265

Query: 274 FDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALR 312
                     + T+   +K     +++ + P A  A LR
Sbjct: 266 LFERKTIRAFSQTALGELKK--AGMQITELPAAEQAKLR 302