Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 21/263 (7%)

Query: 21  VLGTAQANEPPVYKLTLAETWGAN-TPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKA 79
           V G AQA+     K+  AE   A   P++  A +NM K   E S G I  ++ +     +
Sbjct: 18  VSGMAQAD----VKIKFAEVHPAGYAPVV--AEQNMGKKLEEQSKGEISFKMYAGGVLGS 71

Query: 80  PLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGG-GMPLME 138
              V + V+SG   +   S       VP+   F+ +PF             G  G  +++
Sbjct: 72  EKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFN-LPFVFHDQAHMRTIIDGQIGQEILD 130

Query: 139 KVY-APHNLLSFP---GGNSDIQMGGWFKKEINSVDDLQGLKMRIPG--FAGEVLAKLGA 192
           K+  +  N+++     GG  ++    + KK +  + DL+G+K+R+ G     E +  +G 
Sbjct: 131 KITNSEFNMVALAWMDGGTRNL----YTKKPVRQISDLKGMKIRVQGNPVFIETINDMGG 186

Query: 193 KPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAPYYYTAWHEPGSETQFLVNKK 252
               +A GE++++L+ G ID  E   P +  +   ++ A ++    H    E   +++K 
Sbjct: 187 NGIAMATGEIFSALQTGVIDGAENNPPTY-FQHNHYQNAKFFTMTEHLILPE-PIVMSKT 244

Query: 253 KWDTLPKDIQVILETAFRVAAFD 275
            W+ L  + Q +++   R A  +
Sbjct: 245 TWEKLNPEQQALVKKLAREAQME 267