Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., TRAP transporter substrate-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  228 bits (582), Expect = 2e-64
 Identities = 123/327 (37%), Positives = 183/327 (55%), Gaps = 3/327 (0%)

Query: 29  EPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVK 88
           E P  +  +  +W  +   L    ++  K  A M+ G+ QI   +A +    L V D V+
Sbjct: 38  ELPNIRWRMVTSWPKSLDTLFGGAEDFCKAIAAMTGGKFQITPYAAGEIVPGLEVLDAVQ 97

Query: 89  SGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLS 148
           +G  + GH++SYY+ GK P   F   MPFG+ A +Q AW Y GGG+ +++KVY+  N+++
Sbjct: 98  NGTVECGHTASYYYIGKNPALGFACVMPFGLTAQQQNAWLYAGGGLEMIQKVYSDFNIIN 157

Query: 149 FPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTNIAPGELYTSLER 208
           F  GN+  QM GWFKK + S+ DL+GLKMRIPG  G+V+A+LG     I  GEL+ +L+R
Sbjct: 158 FTAGNTGAQMAGWFKKPVESLADLRGLKMRIPGLGGQVMAQLGVNVQVIPGGELFLALDR 217

Query: 209 GTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILET 267
           GTIDA EWVGP  D ++G +K A  YYY  W EPG     LVN+ +W  LP + Q I + 
Sbjct: 218 GTIDAAEWVGPYDDEKLGLNKAAKYYYYPGWWEPGPSLDVLVNQSQWAKLPPEYQAIFQE 277

Query: 268 AFRVAAFDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAASDP 327
           A R A   M ++    N+ +   +      +K   F P +L   ++ +  LL E A+ D 
Sbjct: 278 AARSANLLMLSRYETFNSIALKTLLDGGTILK--SFSPEILTVAQETSRALLAEFASKDA 335

Query: 328 LAKEIIDSQQAYLTKVRDWTRISTQAY 354
             KEI    Q + +++  W  I+  +Y
Sbjct: 336 QFKEIYQQWQTFRSQMFSWNAINELSY 362