Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 84/339 (24%), Positives = 141/339 (41%), Gaps = 25/339 (7%)

Query: 7   LNKSRIMLALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGR 66
           +N   ++ A VLS   G A A     Y+L+     G    +   A    A+L  + S GR
Sbjct: 1   MNLRHLLTAAVLSLCAGPAAAQ---TYQLSHNAAAGNPKDV---ASLKFAELVEQKSEGR 54

Query: 67  IQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYA 126
           ++I +  + +          ++ G      +S       VP       +PF     +Q  
Sbjct: 55  LKIDVGGSAQFGDDAETITNMRLGTIAFSANSQGTTSAVVPEIALLG-LPFLFQDLKQAE 113

Query: 127 WFYYGGGMPLMEKVYAP---HNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPG-- 181
               G   P+ +K+ A      L+     N+ I+     K++I +  DL G+K+R P   
Sbjct: 114 AVMDG---PVGDKIAAAAEQQGLVVLAWWNNGIRETSNSKRQITAPSDLAGMKIRTPPDQ 170

Query: 182 FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMG-FHKIAPYYYTAWHE 240
              ++   LGA PT +A  ELY +L++G +D  E   P  ++     H++ PY     H+
Sbjct: 171 MTVDIFTALGASPTPMAFSELYIALQQGVVDGQE--NPLINIHSSKLHEVQPYISMTNHK 228

Query: 241 PGSETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKV 300
             S T FL +K  +D L  + Q I+  A R A     N+ +    T+    + E   +K+
Sbjct: 229 YES-TPFLASKIVFDALLPEDQQIIRDAAREAG--QLNRQMVGEQTTRLRGELEAAGVKI 285

Query: 301 RDFPPAVLAALRQANNELLQEQAASDP-LAKEIIDSQQA 338
            D  PA      QA   +  +  A  P L  E++ + +A
Sbjct: 286 NDVDPAPFV---QATQSVYDKWRAQYPDLVDELVGAAKA 321