Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide from Sinorhizobium meliloti 1021

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 40/281 (14%)

Query: 10  SRIMLALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGD------APKNMAKLAAEMS 63
           SR + A V++ ++G +       +   +AET      +L D      A  + AK  +E +
Sbjct: 9   SRGLAATVIAGIVGLS------AHSAAMAETTIRLGHVLADTHSWHKASTDFAKEVSEKT 62

Query: 64  NGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATE 123
            GR++I I  + +      V + ++ G    G   S         +  F    FG+I   
Sbjct: 63  EGRVKIEIFPSGQLGTEKEVIEGMQIGTIQGGLIGS--------GSFQFVEPKFGIIEMP 114

Query: 124 QYAWFYYGGGMPLME-KVYAPHNLLSFPGGNSDIQMGGWFKKEINSVD----------DL 172
            YAW         ++ K+      L  P G   I++  W++    ++           DL
Sbjct: 115 -YAWTSREQAFAALDGKLGTALADLLRPKG---IEVLAWWENGFRNITNNKHPIVKPADL 170

Query: 173 QGLKMRIPGFAGEVLA--KLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKI 230
            G+K+R+      +    +LGA+P  +A GELY++L++G  DA E      D    F+++
Sbjct: 171 AGIKIRVTPDKVRLATFERLGAQPAPLAFGELYSALQQGVFDAQENPLSIID-ASSFYEV 229

Query: 231 APYYYTAWHEPGSETQFLVNKKKW-DTLPKDIQVILETAFR 270
             Y     H  G+     V+   W    P+D  ++ E A +
Sbjct: 230 QKYVSMTGHIWGAAC-LTVSSMTWAQVSPEDQAIVKEAAVK 269