Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 6/229 (2%)

Query: 49  GDAPKNMAKLAAEMSNGRIQIRI--DSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKV 106
           G   +  A+L  E + GRI +++   S+  +      F  ++ G  D+   S+  W  +V
Sbjct: 45  GIGGERWAELVKEKTEGRIVMKMYPGSSLLNGDQTKEFTALRQGVIDMAVGSTINWSPQV 104

Query: 107 PNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEI 166
                FS MPF +           GG    +  + A  +++    G +  +     +  I
Sbjct: 105 KELNLFS-MPFLLPDHAGLDALTKGGVGQRLFDLLATKDVVPLAWGENGFRELSNSRHAI 163

Query: 167 NSVDDLQGLKMRIPG--FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLR 224
            +  D++GLK+R+ G     +  + LGA PT ++  +   SL  G +D  E     F + 
Sbjct: 164 RTPADMKGLKIRVVGSPLFLDTFSALGANPTQMSWADAQPSLSTGAVDGQENPLSVF-MT 222

Query: 225 MGFHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAA 273
                +   + T W        F+VNK+ W++  ++ +  +  A   AA
Sbjct: 223 AKLPTLGQKHLTLWGYVADPLIFVVNKEVWESWSEEDRAAVRAAALQAA 271