Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score =  190 bits (483), Expect = 4e-53
 Identities = 106/330 (32%), Positives = 167/330 (50%), Gaps = 16/330 (4%)

Query: 35  LTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDL 94
           LT+  TW  +   LG++   +A     MS GR+ I + +A +       F+ V +G  DL
Sbjct: 35  LTMVTTWPKDYVGLGESASRLAARVRTMSGGRLSITVYAAGELVPAFEAFEAVANGTADL 94

Query: 95  GHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNS 154
            H +  YW+ +     FF ++PFG+ A E  AW ++GG   L + + AP+ +       +
Sbjct: 95  YHGAETYWESRSSAFNFFCAVPFGLTAIETSAWIHHGGAQALWDALSAPYGIKPMLASAT 154

Query: 155 DIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDAL 214
            +QMGGWF KEI  V+D +GL+MRIPG    +L ++GA P  +   +++ +L  G IDA 
Sbjct: 155 GVQMGGWFNKEIKRVEDFKGLRMRIPGLGARILKEVGAVPVALPGSQIHDALRDGAIDAA 214

Query: 215 EWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILET------ 267
           EW+GP  DL +   K+A  YYY  +HEPG+     +N   W  L    + I+E       
Sbjct: 215 EWIGPWSDLALDLQKVARYYYYPGFHEPGTSLAVGINLGVWRGLSDQERAIIEAACGAEH 274

Query: 268 AFRVAAFDMYN-QAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAASD 326
           AF +A ++  N  A+    T+          +++R FP  VL  L +    +++  AA  
Sbjct: 275 AFSLAEYNARNGDALHTLVTNHG--------VQLRAFPTQVLLELGKTAGRVVRAAAADS 326

Query: 327 PLAKEIIDSQQAYLTKVRDWTRISTQAYLN 356
           P  + I D   A+  K   W ++S QA+ N
Sbjct: 327 PETRRIYDHYTAFRRKALTWAQLSDQAFWN 356