Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., TRAP transporter substrate-binding protein DctP from Rhodopseudomonas palustris CGA009

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 10/260 (3%)

Query: 12  IMLALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRI 71
           + L+L ++  L  AQA E     L +A+++ A   ++    K       + +NG +    
Sbjct: 9   VALSLPVTMALAPAQALE-----LKVADSFPAGHYLVRLMLKPWMDDVTKRANGAVTFSY 63

Query: 72  DSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYG 131
               +      +  + +SG  D+G+ +  Y   K+P +   + +P     + Q    Y+ 
Sbjct: 64  YPNQQMGKATDLLRLTQSGVVDIGYIAPSYASDKMPLSEV-AQLPESFTTSCQGTMAYWK 122

Query: 132 GGMP--LMEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEV-LA 188
                 L ++ YAP+ +                K++++S+D +QGLK+R  G A ++ L 
Sbjct: 123 SARDGVLAKQEYAPNKIKLLMAVVLPPYQVFTVKQKVDSMDTIQGLKLRSTGGAQDLTLR 182

Query: 189 KLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAPYYYTAWHEPGSETQFL 248
            LGA P  +A  + Y SL RGT+D + +   +     G  K+  +             + 
Sbjct: 183 ALGAVPVRMAAPDAYESLARGTMDGVLFPADSI-ASYGLDKLVKHATDGVSFGSFIVAYS 241

Query: 249 VNKKKWDTLPKDIQVILETA 268
           ++++ W  LP D++  +E A
Sbjct: 242 ISERAWAKLPDDVKKAMEEA 261