Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., TRAP transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  218 bits (554), Expect = 3e-61
 Identities = 126/347 (36%), Positives = 187/347 (53%), Gaps = 15/347 (4%)

Query: 15  ALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSA 74
           A   + V   A A   P  K  L  ++  +   +    + +AK  AEM++ + QI++ +A
Sbjct: 14  AAAAAAVASPAIAQSSPEVKWRLTSSFPKSLDTIYGGAEYLAKQVAEMTDNKFQIQVFAA 73

Query: 75  NKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGM 134
            +    L   D   +G  ++ H+ SYY+ GK P    F+S+PFG+ A +Q +W Y GGG 
Sbjct: 74  GEVVPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAVFASVPFGLNARQQNSWLYQGGGN 133

Query: 135 PLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKP 194
            L  + Y  + L+ FP GN+  QMGGWF+KEI +V D+ GLKMRI G AG+VL K+G  P
Sbjct: 134 ELANEFYKKYGLVGFPCGNTCTQMGGWFRKEIKTVADMSGLKMRIGGIAGQVLQKVGVVP 193

Query: 195 TNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKK 253
             IA G++Y +LE+GTIDA EWVGP  D ++GF K+A  YYY  + E G       N +K
Sbjct: 194 QQIAGGDIYPALEKGTIDAAEWVGPYDDEKLGFQKVAKYYYYPGFWEGGPTVHAFTNLEK 253

Query: 254 WDTLPKDIQVILETA------FRVAAFDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAV 307
           ++ LPK+ Q IL  A      +  A +DM N          A  +      ++R F   +
Sbjct: 254 FNQLPKNYQAILANAAVNTNTWMNARYDMLNPT--------ALKRLVAGGTQLRPFSNEI 305

Query: 308 LAALRQANNELLQEQAASDPLAKEIIDSQQAYLTKVRDWTRISTQAY 354
           L A  +A NEL  E +A +P  K+ ID+ Q Y +    W +++   +
Sbjct: 306 LDACLKATNELWGEISAKNPDFKKAIDAMQTYRSDQYLWWQVAEYTF 352