Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

 Score =  188 bits (477), Expect = 2e-52
 Identities = 111/321 (34%), Positives = 162/321 (50%), Gaps = 4/321 (1%)

Query: 35  LTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDL 94
           LT+  TWG     + D+ + +A     MS G + + + +A +      VFD V +GQ D+
Sbjct: 34  LTMVTTWGRGLAGVHDSAQYVADAITAMSGGDLTVDVKAAGELVGAFEVFDAVTAGQADM 93

Query: 95  GHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNS 154
            H + YY+ G+ P   +F+++PFGM   E   W+Y+G G  L +++     L SF GGN+
Sbjct: 94  YHGADYYFTGQHPGYAYFTAVPFGMTPQELTNWYYHGDGHALHDELGQIFGLKSFIGGNT 153

Query: 155 DIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDAL 214
             Q GGW+ KEI   +D  GLK R+PG  G+ L KLGA   NI   E+Y +L  G ID  
Sbjct: 154 GPQAGGWYNKEIKGPEDFNGLKFRMPGLGGKALGKLGASVQNIPGSEVYQALSSGAIDGT 213

Query: 215 EWVGPAFDLRMGFHKIAPYYYTA-WHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAA 273
           EW+GP  D + GF +I   YYTA +HEPG+      N+  ++ L    Q ++E A   AA
Sbjct: 214 EWIGPWADEKAGFQEITKTYYTAGFHEPGAALSVATNRDVFEGLSPAHQKVIEMA--SAA 271

Query: 274 FDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAASDPLAKEII 333
              ++ A   N    A  + +   +K  +FP +V  A   A  E L E    D L  +I 
Sbjct: 272 GHQWSLAQFMNNNGAALQRLQSGGVKTLEFPDSVWDAFGSATKETLDE-FMGDELFAKIR 330

Query: 334 DSQQAYLTKVRDWTRISTQAY 354
            S +  +     W   S  AY
Sbjct: 331 GSVEESMKASSGWITKSEGAY 351