Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Dechlorosoma suillum PS

 Score =  204 bits (519), Expect = 3e-57
 Identities = 116/315 (36%), Positives = 174/315 (55%), Gaps = 12/315 (3%)

Query: 7   LNKSRIMLALVLSTVLGTAQANEP---PVYKLTLAETWGANTPILGDAPKNMAKLAAEMS 63
           + +   +L    S  LG A A      PV +  LA ++  +   L  A + +A   A ++
Sbjct: 1   MQRRDFLLGAGASAALGAATARAADGQPVVRWRLASSYPKSLDTLYGASEVLANRVAALT 60

Query: 64  NGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATE 123
            GR QIR  +A +    L   D V+    + GH+   ++ GK     F S +PFG+   +
Sbjct: 61  EGRFQIRPFAAGEIVPGLQALDAVQQDTVECGHTLGSFYVGKNRAFAFDSVLPFGLTTRQ 120

Query: 124 QYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFA 183
           Q AW ++G G+ L+ ++Y  + +++FPGGN+  QMGGWF+KE+  + DL+GLKMRIPG  
Sbjct: 121 QTAWMHFGNGLTLLRELYRDYGVINFPGGNTGAQMGGWFRKELQGLADLKGLKMRIPGLG 180

Query: 184 GEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAPYYY-TAWHEPG 242
           GE++A+LGA P  I   ++Y +LE+G IDA EW GP  D ++GF K+A YYY   W EP 
Sbjct: 181 GEIMARLGAVPQTIPGADVYPALEKGAIDAAEWSGPYDDEKLGFFKVARYYYHPGWWEPS 240

Query: 243 SETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMY---NQAIDANATSWAAMKSEYPDIK 299
           ++  FLVN ++W+ LPK  Q     AF VAA + +       DA     A  +     +K
Sbjct: 241 AQLSFLVNAREWEKLPKAYQ----QAFEVAAAEAHLLTTAEYDAKNPP-ALTRLLAQGVK 295

Query: 300 VRDFPPAVLAALRQA 314
           +R FP  V+ A  +A
Sbjct: 296 LRRFPDDVMKAAYRA 310