Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Dechlorosoma suillum PS

 Score =  231 bits (588), Expect = 3e-65
 Identities = 126/349 (36%), Positives = 191/349 (54%), Gaps = 5/349 (1%)

Query: 5   TYLNKSRIMLAL--VLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEM 62
           ++L K+ + +A     +TV   A A   P  K  L  ++  +   L    + +A     M
Sbjct: 5   SFLKKAGVGIAAGAAATTVSAPAIAQTQPTIKWRLTSSFPKSLDTLYGGAEVLANRLRAM 64

Query: 63  SNGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIAT 122
           +NG+  IR+ +  +    L   D V+ G  +  H++ YY+ GK        S+PFGM A 
Sbjct: 65  TNGKFDIRVFAGGEIVPGLQALDAVQQGTVECCHTAPYYYVGKDKTFALGCSIPFGMNAR 124

Query: 123 EQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGF 182
           +  AW YYGGG  L+++ YA +N++SF GGNS  QMGGWF+KEI ++ D++GLKMR+ G 
Sbjct: 125 QMNAWVYYGGGQKLLDEFYANYNIVSFMGGNSGTQMGGWFRKEIKNLGDIKGLKMRVAGL 184

Query: 183 AGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHEP 241
            G V  +LGA P  IA G++Y +LE+GTIDA EWVGP  D ++GF K+A  YYY  W EP
Sbjct: 185 GGTVFERLGAVPQQIAGGDIYPALEKGTIDAAEWVGPYDDEKLGFFKVAKNYYYPGWWEP 244

Query: 242 GSETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKVR 301
           G    F VNKK+WD LPK+ Q   + A   A   M  +    N  + + + S+   +K++
Sbjct: 245 GPAFSFYVNKKEWDKLPKEYQEAFQAAAYEANVTMLAEYDHKNPPALSRLLSQ--GVKLQ 302

Query: 302 DFPPAVLAALRQANNELLQEQAASDPLAKEIIDSQQAYLTKVRDWTRIS 350
            +   ++ A  +A  E+  E++A +P  K+I      Y      W  ++
Sbjct: 303 KYSDEIMNAAYKAAMEIYAEESAKNPAFKKIYTEYDKYRKTQNAWFSVA 351