Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Dechlorosoma suillum PS

 Score =  238 bits (606), Expect = 2e-67
 Identities = 127/335 (37%), Positives = 187/335 (55%), Gaps = 3/335 (0%)

Query: 17  VLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANK 76
           V +TV   A A   P  K  L  ++  +   +      +A     M+ G+  IR+ +  +
Sbjct: 18  VATTVAAPAIAQSQPTIKWRLTSSFPKSLDTIYGGADVLANRLRAMTGGKFDIRVFAGGE 77

Query: 77  HKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPL 136
               L   D V+ G  ++ H+ SYY+ GK     F +S+PFGM   +  AW YYGGG  L
Sbjct: 78  IVPGLQALDAVQQGTVEMCHTCSYYYVGKDKTFGFGTSVPFGMNPRQMNAWIYYGGGQKL 137

Query: 137 MEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTN 196
           +++ YA +N++SF GGN+  QMGGWF+KEI ++DD++GLKMRI G  G V  +LGA P  
Sbjct: 138 LDEFYANYNVVSFAGGNTGTQMGGWFRKEIKTLDDVKGLKMRIAGLGGAVFERLGAVPQQ 197

Query: 197 IAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKKWD 255
           IA  ++Y +LE+GTIDA EWVGP  D ++GF K+A  YYY  W EPG    F VNKK+WD
Sbjct: 198 IAGSDIYPALEKGTIDAAEWVGPYDDEKLGFFKVAKNYYYPGWWEPGPTIHFFVNKKEWD 257

Query: 256 TLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQAN 315
            LPK+ Q   + A   A   M  +    N T+ + + S+   +K++ +P AVL A  +A 
Sbjct: 258 KLPKEYQEAFQAAAYEANVTMLAEYDHKNPTALSRLLSQ--GVKLQKYPDAVLEAAYKAA 315

Query: 316 NELLQEQAASDPLAKEIIDSQQAYLTKVRDWTRIS 350
            +L  E++A +P  K++      Y      W  ++
Sbjct: 316 MDLYTEESAKNPAFKKVWTEYDKYRRTQNAWFSVA 350