Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., TRAP dicarboxylate transporter, DctP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 77/289 (26%), Positives = 116/289 (40%), Gaps = 41/289 (14%)

Query: 7   LNKSRIMLALVLSTVLGTAQ---ANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMS 63
           + ++ +++A +L TV   A    A + P  K  LA T      I   A +  A L AE S
Sbjct: 1   MKRAAMLVAALLMTVALAAPVQAAYDGPKIKFRLAHTTPPGNHITL-AYQKFADLVAEKS 59

Query: 64  NGRIQIRI-------------DSANKHKAPLGVFDMVKSGQYDLGHSS---SYYWKGKVP 107
            G+I +++             + A K    +GV        +   +S     Y    K  
Sbjct: 60  GGKITVQVFPNAILGSDRVLVEGAQKGTLEIGVSSTPNLANFSKLYSVFDLPYITSPKFQ 119

Query: 108 NTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEIN 167
             L+ +  P G +           G  P+M   Y   + +S              K+ + 
Sbjct: 120 KNLYSAIDPGGTLYDYFLKVANDVGLQPIMYAEYGYRHFVSV-------------KRPLG 166

Query: 168 SVDDLQGLKMRIPGFAGEV-LAK-LGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRM 225
              DL GLKMR      EV +AK L   P+ IA GE+YT+L++GTIDA    G  F    
Sbjct: 167 KASDLAGLKMRTTDSPVEVGVAKALNTNPSPIAWGEVYTALQQGTIDA---EGNTFPHLF 223

Query: 226 G--FHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVA 272
           G   H++  Y  T+ H    +   + NK  WD LP   + ++  A R A
Sbjct: 224 GAKHHEVLKYAITSAHNYCMQVA-MANKAWWDGLPDAAKQVINAAAREA 271