Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Marinobacter adhaerens HP15

 Score =  165 bits (417), Expect = 2e-45
 Identities = 105/344 (30%), Positives = 178/344 (51%), Gaps = 13/344 (3%)

Query: 15  ALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSA 74
           A+ L+T  G+A A++   +K+ +A  +  N P LG     +A      S+G IQ+R+   
Sbjct: 4   AIALTT--GSAFADDLR-WKMPVA--FATNLPGLGSPAAWVADNLTTASDGSIQVRVYEP 58

Query: 75  NKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGM 134
            K   P  +   V  G+   G++   Y +GKVP    F+++PFGM       W+Y+GGG 
Sbjct: 59  GKLVPPFDILQSVSDGKVSAGYTWIGYDQGKVPAIPLFAAVPFGMKPPAYIGWYYFGGGH 118

Query: 135 PLMEKVYAPH--NLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGA 192
            ++++ YA    N+ +   G    +  GW+ + I +++D +GLK+R  G  G+VL KLGA
Sbjct: 119 EMLQETYANKGFNVHAQLCGIIGPETAGWYSEPIETLEDYKGLKIRFAGLGGKVLEKLGA 178

Query: 193 KPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAPY-YYTAWHEPGSETQFLVNK 251
             T +  GELY +LE+GTIDA E+  PA D  +GF+++  Y  +  WH+  +    L+NK
Sbjct: 179 SVTMMPGGELYQALEKGTIDATEFSMPAIDQILGFNQVVKYNLFPGWHQQFTAQYMLINK 238

Query: 252 KKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAAL 311
            +W    +  + ++E +   A      +    N    A  + +   ++    P  VL  L
Sbjct: 239 DEWARATEAQKALVEASCTAATTRGLAEGEYKNGKVLAEFQDK--GVQADQIPRDVLLKL 296

Query: 312 RQANNELLQEQAASDPLAKEIIDSQQAYLTKVRDWTRISTQAYL 355
           R+   E+L+E+A+ D   K + +SQQ ++   + W    T+AY+
Sbjct: 297 REVTQEVLEEEASKDADFKRVYESQQEFMESYKIW---DTRAYV 337