Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., TRAP transporter substrate-binding protein from Ralstonia sp. UNC404CL21Col

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 24/267 (8%)

Query: 10  SRIMLALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQI 69
           S +  AL+ +   G AQA         +A+  G   P    A K M     + ++G+  +
Sbjct: 11  SLLFAALLAAFASGAAQART-----FRVADVHGDTYPT-NMAVKFMGDEIKKATDGKDSV 64

Query: 70  RIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFY 129
           ++   +   +     D V+ G  D+  ++   +   VP ++   S+PF     E +    
Sbjct: 65  KVFGNSALGSEKDTIDQVRIGAIDMVRANGAAFNEIVPESVI-PSLPFLFRDIEHFRKVM 123

Query: 130 YGGGMPLMEKVYAPHN------LLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIP--G 181
           YG   P+ +K+    +      L  +  G   I    + KK I++  D++G+K+R+    
Sbjct: 124 YG---PVGQKILDAFSAKGFVALTFYESGARSI----YAKKAIHTPADMKGVKIRVQPSD 176

Query: 182 FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAPYYYTAWHEP 241
              + +  +G  PT +   E+YT L+ G +DA E   P+++    F ++A  Y    H  
Sbjct: 177 LMVDEIKAMGGTPTPMPFSEVYTGLKTGLVDAAENNIPSYEETKHF-EVAQIYSETQHAM 235

Query: 242 GSETQFLVNKKKWDTLPKDIQVILETA 268
             E   + +KK WDTL    Q  +  A
Sbjct: 236 TPEV-LVFSKKIWDTLTPQEQAAIRKA 261