Pairwise Alignments

Query, 298 a.a., chromosome initiation inhibitor from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (505), Expect = 8e-56
 Identities = 109/291 (37%), Positives = 171/291 (58%), Gaps = 7/291 (2%)

Query: 5   DYRWIEALDSVVSKGSFERAAEQLFISQSAVSQRIKQLEKYLAQPVLIREQPPRPTLVGK 64
           DY+ + AL +V+ +  FERAA+ L +SQSAVSQRIK LE  + QPVL+R  PP PT +G+
Sbjct: 3   DYKLLSALAAVIEQAGFERAAQVLGLSQSAVSQRIKLLEARIGQPVLVRATPPSPTDIGR 62

Query: 65  KLLGLYRRVCLIEQEL---VPELTNQEHVRPVSMSIATNADSLATWLLPALDKVMKSRQV 121
           +LL   ++V L+E++L   VP L   E   P  + IA NADSLATW  PA+       ++
Sbjct: 63  RLLNHVQQVRLLERDLQSQVPAL--DEEGMPERLRIALNADSLATWWAPAIGDFCTQHRL 120

Query: 122 ELNLVIYGESRTLDKLKNGEVVGAISLEPQPITGCSAEYLGQMEYLCVASPEFYQKYFAK 181
            L+LV+  +   L +++ GEV   +    +P+ G  ++ LG M Y  +ASP F  ++FA 
Sbjct: 121 LLDLVVEDQDVGLKRMRAGEVAACLCGSERPVAGARSQLLGAMRYRALASPAFIARHFAD 180

Query: 182 GVTPRSLIKAPAVSYDQYDELHNKFLWDYFAVPRDKVINHTVGSSEAFVRLALSGAAYCL 241
           GV+P  L+++ A+ Y   D L +++L       +D   +H   SSE F+R+  +G  + L
Sbjct: 181 GVSPEKLVRSAALVYGPDDLLQHRYL--ALLGVQDGFEHHLCPSSEGFIRMIEAGMGWGL 238

Query: 242 IPRLQIISELESGALINMTPDFMLSYPIFWHHWQLETGVLLEISEAITAYA 292
            P LQ+  +L SG L+ + PD  +  P++WHHW+    +L  ++  +  +A
Sbjct: 239 APELQVREQLRSGTLLELLPDRCIDVPLYWHHWRNGGQLLTRLTGHLAQHA 289