Pairwise Alignments

Query, 298 a.a., chromosome initiation inhibitor from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., chromosome initiation inhibitor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  223 bits (568), Expect = 4e-63
 Identities = 125/304 (41%), Positives = 176/304 (57%), Gaps = 9/304 (2%)

Query: 4   LDYRWIEALDSVVSKGSFERAAEQLFISQSAVSQRIKQLEKYLAQPVLIREQPPRPTLVG 63
           L+Y  ++AL  VVS+G FERAA+ L I+QSAVSQR++QLE+ + Q +LIR  P   T  G
Sbjct: 2   LEYANLKALAVVVSEGGFERAAKVLHITQSAVSQRVRQLEERVGQSLLIRSTPVVATPTG 61

Query: 64  KKLLGLYRRVCLIEQELVPELTNQEHVRPVSMSIATNADSLATWLLPALDKVMKSRQVEL 123
           K+LL  Y +V L+E EL  EL   +   P ++ IA NADSLATW LPAL  +       L
Sbjct: 62  KRLLRHYSQVQLLESELRSELDADDPNHPTTVRIAVNADSLATWFLPALADMFSRHAWLL 121

Query: 124 NLVIYGESRTLDKLKNGEVVGAISLEPQPITGCSAEYLGQMEYLCVASPEFYQKYF---- 179
            L++  ES T   LKNGE VG ++    P+ GCS+E+LG MEY+CVA+P+F  +YF    
Sbjct: 122 ELIVDDESYTHHLLKNGEAVGCVTTTANPMAGCSSEFLGTMEYMCVATPQFAARYFEWSD 181

Query: 180 -----AKGVTPRSLIKAPAVSYDQYDELHNKFLWDYFAVPRDKVINHTVGSSEAFVRLAL 234
                   +T   L KAPAV +   D+LH K+L  YF +   +   HT+ SSE+F+    
Sbjct: 182 TSNDSGSQLTQAQLTKAPAVVFSTKDKLHEKYLAQYFQMTPGRWWQHTIPSSESFLEAIN 241

Query: 235 SGAAYCLIPRLQIISELESGALINMTPDFMLSYPIFWHHWQLETGVLLEISEAITAYAKS 294
               Y L+  LQ    ++ G LI +TP+  +  P++W HW ++      +  A+ A A+ 
Sbjct: 242 LSLGYGLVGHLQAKPLIDQGVLIELTPEKRMRVPLYWQHWNIKAKQTTLVYRALAATAQH 301

Query: 295 VLPQ 298
            L Q
Sbjct: 302 HLLQ 305