Pairwise Alignments

Query, 298 a.a., chromosome initiation inhibitor from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., transcriptional activator protein MetR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 9/198 (4%)

Query: 4   LDYRWIEALDSVVSKGSFERAAEQLFISQSAVSQRIKQLEKYLAQPVLIREQPPRP-TLV 62
           ++ R +  L ++   GS   AA++ F++QSA+S +IK+LE+ +  P+ +R+  P   T  
Sbjct: 2   IELRHLRTLMALKESGSLAGAAKKRFVTQSALSHQIKELEQRINSPIFVRKSKPLSFTQE 61

Query: 63  GKKLLGLYRRVCLIEQELVPELTNQEHVRPVSMSIATNADSLATWLLPALDKVMKSR-QV 121
           G +LL L   +     E   +L N        + +     S   WL+P +++  +   Q 
Sbjct: 62  GARLLHLAEEILPKVLETETDLKNGLETDTNQLRVGIECHSCFRWLMPVMEQFRQDHPQA 121

Query: 122 ELNLVIYGESRTLDKLKNGEVVGAISLEPQPITGCSAEYLGQMEYLCVAS---PEFYQKY 178
           EL+L       +L+ L+ GE+   ++ +P P    + ++L   E   V +   P   + Y
Sbjct: 122 ELDLSSRHLFDSLNALEMGELDIVLTSDPVPGHSLAYQHLFDFEVKLVVAKDHPLAKEAY 181

Query: 179 FAKGVTPRSLIKAPAVSY 196
               VTP+ L + P +SY
Sbjct: 182 ----VTPKQLSRLPIISY 195