Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., Small-conductance mechanosensitive channel from Pseudomonas fluorescens FW300-N2E2

 Score =  228 bits (582), Expect = 9e-65
 Identities = 123/258 (47%), Positives = 170/258 (65%), Gaps = 5/258 (1%)

Query: 21  TWLTNNSDLLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVR 80
           TW+     ++++YG  V+ A++ L IG  ++  V   +  +L  +  D A+  FI  L  
Sbjct: 16  TWIP----MIMEYGSRVLLAVITLAIGWWLINKVTQKLGALLALRNADLALQGFISTLAN 71

Query: 81  YTLFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGD 140
             L I+++++  S IGV+T S VA IGAAGLA+GLALQGSL+NFA GVLI+ FRPF+ GD
Sbjct: 72  IILKILLIVSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAGGVLILLFRPFRIGD 131

Query: 141 YVEIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSY 200
           ++E  GVAG+VDSIQIF TVL++ DNK V+VPN  +  G ITN +R  TR+V   +GV Y
Sbjct: 132 WIEAQGVAGTVDSIQIFHTVLRTGDNKTVIVPNGNLSNGIITNTNRQPTRKVVFDVGVDY 191

Query: 201 KSDLQKTKRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSM 260
           ++DLQK + VL + L KD R+L DP     + TL DSSI   +R W KT+DYW+V F   
Sbjct: 192 QADLQKAREVLLD-LAKDERVLADPAPEAVISTLGDSSITVSLRIWVKTADYWSVMFMLN 250

Query: 261 QAIKEALDANGIEIPFPQ 278
           +  ++ L   GI+IPFPQ
Sbjct: 251 EQARDRLKDAGIDIPFPQ 268