Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., MscS Mechanosensitive ion channel from Pseudomonas syringae pv. syringae B728a

 Score =  133 bits (334), Expect = 5e-36
 Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 4/240 (1%)

Query: 29  LLIQYGVNVIS----AILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLF 84
           +++QYG  V+     A L+  +G  ++  +       L ++  D  V+ ++   +  TL 
Sbjct: 20  IVLQYGATVVLRLVIAALLWIVGRWLIGVLVRMAQRSLTRQRFDPTVLRYVGSFITVTLH 79

Query: 85  IIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEI 144
           II++IA LS  G++T S  A++ A  LA+G+A  G L+N AAG  I+  RPFK GD +  
Sbjct: 80  IILVIAILSYCGIETTSFAALLAAVALAIGMAWSGLLANLAAGGFIIVLRPFKVGDMISA 139

Query: 145 GGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDL 204
            GV G+V  I +F T + +P+N + +V N+ +    I N+S +  R V++   +   +D 
Sbjct: 140 AGVTGTVVEIGLFVTSINTPENVLNLVGNNKIFSDTIVNFSSNAFRSVELTAILPGSADE 199

Query: 205 QKTKRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIK 264
           QK    L++ + + P +L  P + + + +    SI   VRP+C    Y +V+  ++  I+
Sbjct: 200 QKIIPRLKDQIARLPNVLSSPAVDVHLSSTTADSITLSVRPYCHNDHYDSVHRQTLALIR 259