Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., MscS Mechanosensitive ion channel from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (507), Expect = 4e-56
 Identities = 106/255 (41%), Positives = 162/255 (63%), Gaps = 1/255 (0%)

Query: 29  LLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIVL 88
           ++++YG  ++ A++ L +G  ++  + G +  +L  +  D A+  F+  L    L I+++
Sbjct: 20  MIMEYGSRLLLAVVTLCVGWWLINRLTGKLGALLALRHADLALQGFVSNLANVILKILLV 79

Query: 89  IAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVA 148
           ++  S IGV+T S VA IGAAGLA+GLALQGSL+NFA GVLI+ FRPF+ GD++E  GV+
Sbjct: 80  VSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAGGVLILLFRPFRIGDWIEAQGVS 139

Query: 149 GSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQKTK 208
           G+VD+IQIF TVL++ DN+ V++PN  +  G ITN +R  TR++   IGVS+ +DL+K  
Sbjct: 140 GTVDNIQIFHTVLRTGDNRTVIIPNGNLSNGIITNTNRQPTRKITFDIGVSHDADLKKAL 199

Query: 209 RVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIKEALD 268
           +VL + +  DPR+LKDP     V  L +++I   +R W  + D   V        ++ L 
Sbjct: 200 QVLLD-MADDPRVLKDPAPQAVVAALGENAITLSLRVWTSSGDMGDVTSMFNIEARDRLK 258

Query: 269 ANGIEIPFPQMDVHL 283
             GIEIP PQ  V +
Sbjct: 259 DAGIEIPLPQRIVRV 273