Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1134 a.a., MscS Mechanosensitive ion channel from Pseudomonas syringae pv. syringae B728a

 Score =  108 bits (269), Expect = 7e-28
 Identities = 71/252 (28%), Positives = 127/252 (50%), Gaps = 6/252 (2%)

Query: 34   GVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIVLIAALS 93
            G  VI  I  +  GNL   G+   +  VL +  + +        L+ YT+  +  +  LS
Sbjct: 836  GAGVIIVITFVLAGNL--PGLLEVL--VLSRMNLAQGSAYATTTLLSYTIAGVGFVTTLS 891

Query: 94   RIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVAGSVDS 153
             +GV    +  ++ A  + +G  +Q   +NF +G++I+  RP + GD + IG ++G+V  
Sbjct: 892  TLGVSWDKLQWLVAALSVGLGFGMQEIFANFISGIMILFERPVRIGDTITIGALSGTVSK 951

Query: 154  IQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHET-RRVDMVIGVSYKSDLQKTKRVLR 212
            I+I  T +   D K ++VPN   I G + N+S  +T  RV + +GV Y SDL   + +L 
Sbjct: 952  IRIRATTITDFDRKDIIVPNKTFITGQLINWSLTDTVTRVTLKLGVDYGSDLDLVRSLLL 1011

Query: 213  ETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCK-TSDYWAVYFDSMQAIKEALDANG 271
            +   ++PR+LK+P+  +  L   +S+++  +R   +   D   V  +  + I        
Sbjct: 1012 QAARENPRVLKEPEPIVYFLNFGESTLDHELRMHVRDLGDRNPVLDEINRFINREFKKQH 1071

Query: 272  IEIPFPQMDVHL 283
            I I F QM+++L
Sbjct: 1072 INISFRQMEIYL 1083