Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., putative small-conductance mechanosensitive channel (RefSeq) from Shewanella amazonensis SB2B

 Score =  283 bits (723), Expect = 4e-81
 Identities = 139/259 (53%), Positives = 187/259 (72%)

Query: 28  DLLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIV 87
           +L++ YG+ VI AI+I  +G      V      +L  +++D  V  F+  L    +F+  
Sbjct: 13  ELIMTYGLKVIFAIIIFLVGKYFSNLVKKLTTKMLNNRKVDPTVTSFVANLAWAVVFVFT 72

Query: 88  LIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGV 147
           +IA L +IGVQTAS+VAVIGAAGLAVGLALQGSLSNFAAGVL+V FRP + GDY+E  G+
Sbjct: 73  VIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFAAGVLMVLFRPCRVGDYIEAAGI 132

Query: 148 AGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQKT 207
           AG+VD I IF T L++PDNK++V PNSA++ G ITNYS  +TRRVDMVIGV+Y +D++ T
Sbjct: 133 AGTVDEITIFSTKLRTPDNKVIVAPNSAIMNGTITNYSAMDTRRVDMVIGVAYDADIKLT 192

Query: 208 KRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIKEAL 267
           K+VL + L+ +  +LKDP  T+ +  L  SSINFVVRPW K +D+WA  F+  + IK AL
Sbjct: 193 KKVLTDILDNNQYVLKDPAYTVALSELGASSINFVVRPWVKGADFWAAKFELTEQIKNAL 252

Query: 268 DANGIEIPFPQMDVHLNKI 286
           DAN I IP+PQMD+H+ ++
Sbjct: 253 DANNIGIPYPQMDIHVKEL 271