Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1060 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 88.2 bits (217), Expect = 7e-22
 Identities = 52/226 (23%), Positives = 115/226 (50%), Gaps = 2/226 (0%)

Query: 61   VLKKKEMDKAVVDFIHGLVRYTLFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGS 120
            +L++ ++ +     I  + RY +    +++  S +G++ + +  ++ A  + +G  LQ  
Sbjct: 823  ILQRLDLTQGTGFAITTVSRYLVVFFGMLSGFSTLGMEWSKLQWLVAALSVGLGFGLQEI 882

Query: 121  LSNFAAGVLIVAFRPFKSGDYVEIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGA 180
             +NF +G++I+  +P + GD V I  + G+V  IQI  T +   D K ++VPN A I   
Sbjct: 883  FANFISGLIILFEKPVRIGDTVTIRELTGTVSKIQIRATTIVDWDRKEIIVPNKAFITEQ 942

Query: 181  ITNYSRHE-TRRVDMVIGVSYKSDLQKTKRVLRETLEKDPRILKDPDMTIGVLTLADSSI 239
            + N+S  +   RV + + V+  SD  + +  L + +++    L  P+  +        + 
Sbjct: 943  LINWSLSDPITRVIVYVSVARDSDPARVEAALYQAVKECDDALTTPEPEVWFAGFGQHTQ 1002

Query: 240  NFVVRPWCK-TSDYWAVYFDSMQAIKEALDANGIEIPFPQMDVHLN 284
            ++ +R + K  +  W +     + + + L  N +E+ +PQ++VH++
Sbjct: 1003 DYEIRAYAKDMNTRWPLRHKLHKQVSKKLRENHLELAYPQLEVHIS 1048